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2
Critical Knowledge Gaps in Mass Transport through Single-Digit Nanopores: A Review and Perspective
Not all nanopores are created equal. By definition, nanopores have characteristic diameters or conduit widths between ∼1 and 100 nm. …
Samuel Faucher
,
Narayana Aluru
,
Martin Z. Bazant
,
Daniel Blankschtein
,
Alexandra H. Brozena
,
John Cumings
,
J. Pedro de Souza
,
Menachem Elimelech
,
Razi Epsztein
,
John T. Fourkas
,
Ananth Govind Rajan
,
Heather J. Kulik
,
Amir Levy
,
Arun Majumdar
,
Charles Martin
,
Michael McEldrew
,
Rahul Prasanna Misra
,
Aleksandr Noy
,
Tuan Anh Pham
,
Mark Reed
,
Eric Schwegler
,
Zuzanna Siwy
,
Yuhuang Wang
,
Michael Strano
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DOI
Machine Learning Accelerates the Discovery of Design Rules and Exceptions in Stable Metal–Oxo Intermediate Formation
Metal–oxo moieties are important catalytic intermediates in the selective partial oxidation of hydrocarbons and in water splitting. …
Aditya Nandy
,
Jiazhou Zhu
,
Jon Paul Janet
,
Chenru Duan
,
Rachel B. Getman
,
Heather J. Kulik
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DOI
ChemRxiv
Reply to “Comment on ‘Evaluating Unexpectedly Short Non-covalent Distances in X-ray Crystal Structures of Proteins with Electronic Structure Analysis’”
Helena W. Qi
,
Heather J. Kulik
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DOI
Stable Surfaces That Bind Too Tightly: Can Range-Separated Hybrids or DFT+U Improve Paradoxical Descriptions of Surface Chemistry?
Approximate, semilocal density functional theory (DFT) suffers from delocalization error that can lead to a paradoxical model of …
Qing Zhao
,
Heather J. Kulik
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DOI
ChemRxiv
Designing in the Face of Uncertainty: Exploiting Electronic Structure and Machine Learning Models for Discovery in Inorganic Chemistry
Recent transformative advances in computing power and algorithms have made computational chemistry central to the discovery and design …
Jon Paul Janet
,
Fang Liu
,
Aditya Nandy
,
Chenru Duan
,
Tzuhsiung Yang
,
Sean Lin
,
Heather J. Kulik
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DOI
Quantum Mechanical Description of Electrostatics Provides a Unified Picture of Catalytic Action Across Methyltransferases
Methyl transferases (MTases) are a well-studied class of enzymes for which competing enzymatic enhancement mechanisms have been …
Zhongyue Yang
,
Fang Liu
,
Adam H. Steeves
,
Heather J. Kulik
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DOI
ChemRxiv
The Protein’s Role in Substrate Positioning and Reactivity for Biosynthetic Enzyme Complexes: The Case of SyrB2/SyrB1
Biosynthetic enzyme complexes selectively catalyze challenging chemical transformations, including alkane functionalization (e.g., …
Rimsha Mehmood
,
Helena W. Qi
,
Adam H. Steeves
,
Heather J. Kulik
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DOI
ChemRxiv
Evaluating Unexpectedly Short Non-covalent Distances in X-ray Crystal Structures of Proteins with Electronic Structure Analysis
We investigate unexpectedly short non-covalent distances (<85% of the sum of van der Waals radii) in X-ray crystal structures of …
Helena W. Qi
,
Heather J. Kulik
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DOI
ChemRxiv
Learning from Failure: Predicting Electronic Structure Calculation Outcomes with Machine Learning Models
High-throughput computational screening for chemical discovery mandates the automated and unsupervised simulation of thousands of new …
Chenru Duan
,
Jon Paul Janet
,
Fang Liu
,
Aditya Nandy
,
Heather J. Kulik
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DOI
ChemRxiv
Non-empirical, low-cost recovery of exact conditions with model-Hamiltonian inspired expressions in jmDFT
Density functional theory (DFT) is widely applied to both molecules and materials, but well known energetic delocalization and static …
Akash Bajaj
,
Fang Liu
,
Heather J. Kulik
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DOI
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